Create Lilace object from separate count files for each bin and replicate

Create Lilace object from separate count files for each bin and replicate

Usage

lilace_from_files(
  file_list,
  variant_id_col = "hgvs",
  position_col = "position",
  mutation_type_col = "type",
  count_col = "count",
  delim = "\t"
)

Arguments

file_list

a list containing a separate list of bin count files for each replicate (see end of intro vignette for example)

variant_id_col

column name for variant id

position_col

column name for position information

mutation_type_col

column name for mutation type information

count_col

column name for counts

delim

the field separator character (see ?readr::read.delim)

Value

a lilace object, with data stored in $data