Vignettes

The following vignettes will guide you through how to use Rosace and interpret the results. For specific questions or issues, check out the FAQ page .

• Introduction to Rosace:
  • Setting up Rosace
  • How to run Rosace
  • Interpreting Rosace results, identify loss of function and gain of function mutations
• Visualizing Rosace scores:
  • Heatmap, violin plot, and density plot
• Multiple mutations:
  • Dealing with variants containing multiple mutations
• More installation instructions:
  • Install cmdstanr
  • Using Docker
• Introduction to Rosette:
  • Simulating count data using Rosette