OutputScore

R Documentation

Output Score data frame

Description

If the object is a Rosace object, output the meta-information of the variants in the data frame as well.

Usage

OutputScore(object, pos.info = FALSE, sig.test = 0.05, ...)

## S3 method for class 'Score'
OutputScore(object, pos.info = FALSE, sig.test = 0.05, ...)

## S3 method for class 'Rosace'
OutputScore(object, pos.info = FALSE, sig.test = 0.05, name, ...)

Arguments

object	Either a Rosace object or a Score object
pos.info	Boolean, whether to output the position-level score
sig.test	Numeric from 0 to 1, threshold for test statistics
...	Additional arguments passed to OutputScore
name	The targeted name of Score object

Value

A data frame of variant score. If pos.info is TRUE, return a list of data frame (variant and position)