R: Create a Rosette object

CreateRosetteObject

R Documentation

Create a Rosette object

Description

Create a Rosette object

Usage

CreateRosetteObject(object, project.name, ...)

## S3 method for class 'Rosace'
CreateRosetteObject(
  object,
  project.name,
  score.name,
  pos.col,
  mut.col,
  ctrl.col,
  ctrl.name,
  ...
)

## S3 method for class 'Score'
CreateRosetteObject(
  object,
  project.name,
  pos.label,
  mut.label,
  ctrl.label,
  disp,
  disp.start,
  ...
)

Arguments

`object`	An object: numeric, Score, or Rosace
`project.name`	Name of the Rosette object
`...`	Additional arguments to be passed to the creation method.
`score.name`	A character string indicating the name of the score
`pos.col`	A character string indicating the name of the position column in var.data
`mut.col`	A character string indicating the name of the mutant column in var.data
`ctrl.col`	A character string indicating the name of the control column in var.data
`ctrl.name`	A character string indicating the label of the control in the control column
`pos.label`	A vector of position labels
`mut.label`	A vector of mutant labels
`ctrl.label`	A vector of control labels (boolean: ctrl or not)
`disp`	Dispersion of raw count
`disp.start`	Dispersion of variant library

Value

A Rosette object